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15-1657-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 15226901 [Map]; Strand: c
      • AT3G43270.1 - [+] show detail - Plant invertase/pectin methylesterase inhibitor superfamily
        Distance: -1441; Region: intergenic
      • AT3G43280.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 2877; Region: intergenic
    Flanking Genome Sequence: 15-1657-1 - 5-prime edge 
    CTGATAAAGT AGGCAAGACA TTCCAACCAA AAAGAATTTG GCAAGATAAA 
    CGAAGTTATA TGAACTAGAG AATCAAGCTA TACAACAAAT CTTTGTTCAA 
    TTTTTTTATT AATAATATAC ATACATGATA ATATTTTAAT AAGATGCCTC 
    AGACGGACTG TGCAGTACTG CATGATAATA TCATTTTTAT TTTTGTGCAT 
    TGCATTAGAA CTTATATGTC ACGAAAAAAT AATTTAATTT GTAAGATAAT 
    TTTAGAAACC GTCATCAATG TGAGTACAGA CGAAGATAAT GGTTTGAGAG 
    GACACGTGTA GATTAGATCA CGGTCGGAGA TTGTCCCAAA TTTCTTCAGA 
    TCACGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 15227017 [Map]; Strand: c
      • AT3G43270.1 - [+] show detail - Plant invertase/pectin methylesterase inhibitor superfamily
        Distance: -1557; Region: intergenic
      • AT3G43280.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 2761; Region: intergenic
    Flanking Genome Sequence: 15-1657-1 - 3-prime edge 
    TTTATCAGTG ATAAACTTTT TTTTTATGTA CGTTGAAGTC TACGTTGTTG 
    TTTTACACCT CAAATAATTC AATAAACGAN ACTCCTTTTA CAAAACAGAA 
    AAAATAAAAA TAAAAAGCGA GAACGAAGAA GGCTCGAATT TGAGGTTTCC 
    AAAATTTTGA AGGAGTAACA TTGAAAATAT TGTAGTACGT AAATACTAAA 
    TAATATTTGG CTTGAGTTAC TTCGTGTAAT TTAATGTTTT GTAGTTGTTC 
    ATTTCTAATA ACATCATTTT TACATGTCCA ATTAGATTTT TCATAAAAAG 
    TTCGTTTANA AAATACATTT ATGAATTTTC TCATATTCCA CAACCACATA 
    AATTAACGCT TCCTAATATT AATGTCTCAT TGATCTTGTA AGAAAATGGA 
    ATTGTCTTTT GTAAATAGAG AAAGAGAAAG CAGAAATGTC GGTTTTTAAA 
    TTGGGGAAAA ANAGTTGTGG AGTCATGCGT CGGNGCCTCA CATTTCAAAT 
    CACACTTGTT TTTGTGTTAC GTACTCTTAG TATCCTTGGN GGGTCTCANT 
    TCCAATCTCT TGGTCAATTT ATCGTTGCCT AATGCATGCA TTTTTGTTGN 
    CAAAATTTTG TCTCGTTCTA ANATCCGTAG CGTTTTTAAG AAAATCCTAT 
    GATAGACANC TTTTCAACGT CTAATTTTGT TTTATTTCAN CCTNCNAAAA 
    AACCGGAGCT GGTTATNTCC AAACCN

AT3G43270.1

Model type
Protein coding
Short Description
Plant invertase/pectin methylesterase inhibitor superfamily
Computational Description
Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: plant-type cell wall; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase, catalytic (InterPro:IPR000070), Pectinesterase inhibitor (InterPro:IPR006501), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: pectin methylesterase 44 (TAIR:AT4G33220.1); Has 2924 Blast hits to 2864 proteins in 331 species: Archae - 6; Bacteria - 617; Metazoa - 1; Fungi - 199; Plants - 2076; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G43280.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19240.1); Has 5 Blast hits to 5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR