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Mutant Lines
15-1126-1

15-1126-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 3; Position: 3387389 [Map]; Strand: c
- AT3G10820.1 - [+] show detail - Transcription elongation factor (TFIIS) family protein
  Distance: 0; Region: exon1 (CDS)
- AT3G10820.2 - [+] show detail - Transcription elongation factor (TFIIS) family protein
  Distance: 0; Region: exon1 (CDS)

ATTTTCCCTC GCCGTTTCGT GATGGCGAAG ATGAGACCAT CTGTTTCGTT 
GGATACTTGG AGAGAGTATT TCCGGCGAGG AGATTCTGAT ATTTTTGGTA 
TCATTGATCA TGCGATTATG GTAGCTGCNT GCAGATTGGC CAAAGGAGTT 
TAAATCCAGG AGTGATAGAA TTGCNTGAGC TTCTCTTCTC TTGTAAAGTG 
AGTCGCTGCA TTGGTTGTGA CCACCTTGAG CTCTCGATAG CTGGAGACGA 
AGCGGCGGTG GAGATAGTTG GAGTTGGCGG CGGCGGTGAT AGGGGTGATT 
CTGGTGTTGC GACGGGTGAA GGTGAAGAGG CGTCTGTGAG TGTTGATGAG 
GTTATGAGGA TCAGAGATAT CTTGTCGAAC AAAGACGATG AGGTTTTTAG 
TCTCTTTGCT TGGATTACAT TAAAACTTGT GCTAATTCAT TGGTTAAATT 
TGGAATCTTT GTGTTGATTG TTGAGTTTTT GGTTTCTGTC ATCTTTTTTG 
CAGAAAGATT CTGTGTTACT CGAATCTCTG AGAAAGCT

AT3G10820.1

Model type: Protein coding
Short Description: Transcription elongation factor (TFIIS) family protein
Computational Description: Transcription elongation factor (TFIIS) family protein; FUNCTIONS IN: transcription regulator activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type (InterPro:IPR003617), Transcription factor IIS, N-terminal (InterPro:IPR017923), Transcription elongation factor, TFIIS/elongin A/CRSP70, N-terminal (InterPro:IPR010990); BEST Arabidopsis thaliana protein match is: Transcription elongation factor (TFIIS) family protein (TAIR:AT5G05140.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G10820.2

Model type: Protein coding
Short Description: Transcription elongation factor (TFIIS) family protein
Computational Description: Transcription elongation factor (TFIIS) family protein; FUNCTIONS IN: transcription regulator activity, DNA binding; INVOLVED IN: transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Transcription factor IIS, N-terminal (InterPro:IPR017923), Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type (InterPro:IPR003617), Transcription elongation factor, TFIIS/elongin A/CRSP70, N-terminal (InterPro:IPR010990); BEST Arabidopsis thaliana protein match is: Transcription elongation factor (TFIIS) family protein (TAIR:AT5G05140.1).
Link: InterPro Scan - TAIR