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15-0777-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5390942 [Map]; Strand: w
      • AT1G15670.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-0777-1 - 5-prime edge 
    GNGGAGAGCT GNTTNGNTGG CAGCCTGGGN NTGGAGTAAN NGACACAAGA 
    GACGNTCGAC CNGNNNGTGC GNTGACCTAN CATNGCGGTG NACGCGATGA 
    NNGACNACNG ACCNCTGCAT GCCCCGGGAA NGGACCTGCA GACGNCGNGN 
    CATGNATNTT ACCGNGGCGA TAAGGAGGTC TGGAAACCTG GNTGTGATCG 
    GTTCGGCTCG GTACGGCGAA CCAAGTGTAG GGTATAATTG GGATATGAGC 
    AATTCTCGAT GGNTAAAACT GGAAACACAT GATAAATATG AAGGCCACGT 
    NCAAGCTGGT TGCTTCTTGG AGATATAAAA AAACTTTAGA AAAGGTTCCG 
    AATCTTTTGT ACGTCGNCCT TGCGAAATGA CGGNAAATNG GGNCGGNNGA 
    TTNTTTCAAG NGNGACTGNA TAAATATTAT ATNGNNATNG ATAAATNNGN 
    NAGCTNGATN GNAAAAATNN NATNGNCGAG NGATNNNATA GGNNNNAAAC 
    NNANNGNNGA ATNGNNGNGN GANGGNNGNN NGNNAGNGGG NGNNGNNANA 
    NGNNNNNANN NAGGGNAGNN NNNNNGGGGG AAANAAANNN NACNNNCNNN 
    NNNGNNNNNN NNAANNAGNN NNNNNNGGNG NNNNNNNNNG NNNGNGNNNN 
    AAANNNGNAN AAAGNGNGNN GNGG

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5390841 [Map]; Strand: w
      • AT1G15670.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 15-0777-1 - 3-prime edge 
    GTCANAAGGG AGNAACNGTA NNAGCNNGTG GACTCCANCG CCTTGTGTGN 
    GACGTNTNAC GATTGGCAGT GATACTTGAN TNCCCTNGTG NCTCCGTGGA 
    NNAACNACCG NTGACATGGA ATTTGCCAGC GTGGAAAATA NCTGNGCATN 
    CGGTATCGNT CACGGCCCNT ATCCGGCAAG AAAGCCCATC TGTGTTCTGC 
    CACGTCATAC ANCACTAGCT GACATCATCG CGTTCTTGTC TTCGTCGTGT 
    CCTCCAGCCA CAAAGACGTT CCGTTGAGAA TCCGAAGCGC AAGCGAAGAA 
    GGAACGTGGT CCACCTGGCA TGCTCTTCCC GACGCGCCAC GTGGAGGTCA 
    AGAAGCTGAA AACGAAGACC GAATCAGAGG TACGCCATGT AACCGGGTCA 
    AGCCCGCCCA ATACAACAAG ATCCGACCCG ACAGAGACTA ATCTGCAGAA 
    CAGAGGCAAC CCGTTGGAAT GACCTGGAAC CGGAGGCAGC TCGCTCCTTA 
    GACCGGTACC AAGTTCAAGA ACCGAGATTC GGTACACGGG GGTGGGGATG 
    GTTTTATTAC CCGATACGAG TTCTTTAACC GGGTCNACCC NAGCTTGANA 
    CAANACAACA AGCTCTTGAC TATGTNCTGA ANCTACCANC CCGGGCCGTN 
    NACCACNCNT GNCCNT

AT1G15670.1

Model type
Protein coding
Short Description
Galactose oxidase/kelch repeat superfamily protein
Computational Description
Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G80440.1); Has 1241 Blast hits to 1194 proteins in 125 species: Archae - 6; Bacteria - 99; Metazoa - 399; Fungi - 6; Plants - 685; Viruses - 3; Other Eukaryotes - 43 (source: NCBI BLink).
Link
InterPro Scan - TAIR