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13-5714-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2051626 [Map]; Strand: w
      • AT1G06690.1 - [+] show detail - NAD(P)-linked oxidoreductase superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 13-5714-1 - 5-prime edge 
    GGGNAAAACT AACAAAATCC GGTTATACGA TAACGGTCGG TACGGGATTT 
    TCCCATCCTA CTTTCATCCG ATTCGAAAAA ATCAATACCG TTGTCAAGAC 
    TGGTGTCGAA AGCACCTTTA GCCGCCTTCA ATTTTCTGTC TACCATCACA 
    GAGAATAAAA AAAAAGAGAT TAACCTTTTA ATTCATTTCA ATACTTTTGT 
    TTCACAAAAT GTATAAAATT GAGAATCGAA ATTAAGAGAA CTGACCATCC 
    CACTGGAAAT CATTCCAATA GCTGTTATCA CCCCAAGACC AGACTCCGAT 
    CCCAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 2051581 [Map]; Strand: w
      • AT1G06690.1 - [+] show detail - NAD(P)-linked oxidoreductase superfamily protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 13-5714-1 - 3-prime edge 
    TTTTCGATAC CGCAGAAGTT TATGGTTCCA AGGTAAGCGT AAGAAAGCTG 
    ATCACTCTTC GTAAATTGGT TTATTCTGAA ACTAATTTGG AAATCTCCAT 
    CTTTTATAGT TTTCCCTGGG TGCTATAAGC TCTGAAACTC TTTTAGGAAG 
    GTAATTTGTT TCGAAAACAT ATAACAGTGT GCCACACTAT CCTCATATAT 
    ATTCCTCTTG ACTGTCATTG GTGAGATTTT CGAACAGATT CACCCGTGAG 
    AGAAAAGAGA GATATCCCGG AGCTGAGGTT TCGGTTGCAA CCAAGTTTGC 
    TGCATTGCCA TGGCGATTTG GTCGTGAAAG TGTTGTCACT GCCCTTAAAG 
    ATTCCCTTTC CCGGCTTGAG CTTTCATCTG TTGATCTCTA TCAACTGCAT 
    TGGTATGCTC CCCTAATTCA TGTTGGAGTA AACAACACTA GAAGGTAACA 
    ATCTCACTAT TTTCTTAATT ATATTTCAGG CCAGGACTAT GGGGAAATGA 
    AGGTTTTTTC TTAAGAGCAG CACTGAATCT ACTTTTAACT AGAGTTCTTG 
    TCACTTTTGG TGATTATATC AAATCCATTG ACATTGNGAG TTATGTTTTT 
    AGGATATCTT GATGGTCTTG GGGATGCTGT TGAACAAGGA CTTGTCAAGG 
    CTGTTGGNGT TTCTAACTNC ANCGGGNNTC ATTTNAATCN GGTTTTTTCC 
    T

AT1G06690.1

Model type
Protein coding
Short Description
NAD(P)-linked oxidoreductase superfamily protein
Computational Description
NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT5G53580.1); Has 30017 Blast hits to 30001 proteins in 2563 species: Archae - 570; Bacteria - 19734; Metazoa - 1881; Fungi - 2197; Plants - 1331; Viruses - 0; Other Eukaryotes - 4304 (source: NCBI BLink).
Link
InterPro Scan - TAIR