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13-5532-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2244273 [Map]; Strand: c
      • AT3G07090.1 - [+] show detail - PPPDE putative thiol peptidase family protein
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 13-5532-1 - 5-prime edge 
    GATTTAAGCC AAGGCTTGGC ACGCCAGCTC TCACAATCAC TCCTGGGAAA 
    GGTTATTGAA GGTGTATGGT GAGTCAAATC TCTGTCACAT GTTCGTATTT 
    GATCTGTTGT GTTGTATATG CCAAATTTGT TTTGAACATT TGTCCTGTGT 
    AGTGCCATTC ATAGGGTTTG ATATTATTGT TTTAGCTGTT GAACATGGTT 
    GCAGTTAACC CAATGTAAAA GATATTGGCA TGACTGGTTG GTGTATGTAA 
    ATGTGTCTAA GCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2244389 [Map]; Strand: c
      • AT3G07090.1 - [+] show detail - PPPDE putative thiol peptidase family protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 13-5532-1 - 3-prime edge 
    CTTAAATCAT AGACATTCAA TGTTACCTTA TGCGCTNGCT GCCATATCAC 
    ATATATC

AT3G07090.1

Model type
Protein coding
Short Description
PPPDE putative thiol peptidase family protein
Computational Description
PPPDE putative thiol peptidase family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT5G25170.1); Has 872 Blast hits to 872 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 235; Fungi - 119; Plants - 332; Viruses - 0; Other Eukaryotes - 186 (source: NCBI BLink).
Link
InterPro Scan - TAIR