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12-0671-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 610051 [Map]; Strand: w
      • AT2G02310.1 - [+] show detail - phloem protein 2-B6
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-0671-1 - 5-prime edge
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCAC GTCGTGTTTT TGCACCTTGG ATGAGGAACC
    GAGAACTTGT CTGATTTTTT GTCTAGAGTC AACGCCGAGT TTTTGTCCCA
    TTGTTGCTTC TACCTGTAAT GTTTTTCTTC GTTTAGATTC GAAGATAAGA
    ATTTAAAGAC TCGTCTAAAG TCGTCTCCGA CGCTAAATAC CTATAAGAAA
    AAGCCGTGCA CACNGTATTG AAACTGCCCT TCTTTGGCCA TTAAGTCAAC
    GCCCGTGTTT TCGTTTTCCT CACAAGTCAC GTTCCATGTG TTTCATGCGT
    TTTTCTTTGT TTGTAAACAT TTGTTTAATG TGTTTAATGT CGGTTCAATA
    TTTTTTGACA ACATCTTCTA CTCTTATAGC AAAGGTAAAA CTTAATTTTC
    GCAAAACAAT TTATTTATTA TACCACACTC AACCGAAAAC ACTCTTTCAT
    AAATTGGAGT TTAACTCTTT ACTTCGTTGT AAAACTAATT GACAATAATA
    CCGGTTCATC AGGTAAAAGG GAGTTAATTT CTAGGGCATT TCATTACCGG
    GTTTTTTCGT AGGACGGATT TCAATTCCTT GAATAATCAA GCCACGTTTC
    GTATTGCGCT GAGTAGTCTC TGAAACACTC ATCTCAATTT CATCATTATT
    CCTAAATGCT CCTTCATTAA AGAATT
  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 610046 [Map]; Strand: w
      • AT2G02310.1 - [+] show detail - phloem protein 2-B6
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 12-0671-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCG 
    TGGAATCTAT CGGTGGAGGC GGGGGAGAGA TCGTTCCCGG TCATTCGCCG
    TTTGATGACT TGCCGGAGGA TTGCATCTCC AACATAATCT CTTTTACAAG
    TCCACGGGAC GTGTGCGTCT CCGCTTCAGT TTCAAAATCC TTCGCACATG
    CNGGTCCAGT GTGATAGTAT ATGGCAGAAG TTTCTTCCGT CGGAGTATGA
    ATCCCTGATT CCTCCGTGGC GAGTTTTCTC ATCGAAGAAG GACCTCTATT
    TCAGTCTTTG CTACGATCCT GTTCTAGTTG AGGATGGCAA AAAGGTATTT
    ATATTTGTCC ATTTATCAGT TTTACACTTT GTTTCTACAT TTTGAGAATA
    ATGACCTGTC TCTTGCCTTC AAGTGGGAAA CTATCTATTC AGATTGATCG
    TTTGAGATTT TTTTCTTTCT TTTTGAAAAT AAAAGAGCTT TTGGTTAGAG
    ACGGCAAGTG GGAAAAAGTG TGTACTGTTA GCTGCAAAGG AACTGTGGAT
    CACAGGAGGG AATAATCCTG AGTATTGGCA ATGGATTGAA CTTTGTGAAT
    CTAGGTATTT ATTACTTAAA TTCGATTGTA ATGACTCCTT TTTATTATAT
    AAAAACACAC TGAGCATAAC TAAATCGAAA TGCTTGAACT TGAAACGAAC
    CGAAATTTAG TTGTAAATCA ATTGGCTTTA TTGTTTCAAA ATATAAATAA
    AATTTAAGAC AATACATTAC TATAATGACG AATTGACGAT CAATCATTTA
    GTACATAATA A

AT2G02310.1

Model type
Protein coding
Short Description
phloem protein 2-B6
Computational Description
phloem protein 2-B6 (PP2-B6); FUNCTIONS IN: carbohydrate binding; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf whorl, sperm cell, root, leaf; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: phloem protein 2-B2 (TAIR:AT2G02250.1); Has 502 Blast hits to 484 proteins in 31 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 498; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR