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RIKEN Plant Science Center

RIKEN Genomic Sciences Center

Promoter Search Result

There are 27 Results.
IdentifierCis AccessionDescrip tion
 MAMMALENHANS000121"Core sequence" in enhancers from polyoma virus and from the IgM heavy chain gene;
 MARABOX1S000063"A-box" found in SAR(scaffold attachment region; or matrix attachment region, MAR);
 MARARSS000064"ARS element"; Motif found in SAR (MAR);
 MARCEN3S000065"CEN III element"; Motif found in SAR (MAR); centromere element;
 MARTBOXS000067"T-Box"; Motif found in SAR (scaffold attachment region; or matrix attachment region, MAR);
 MEJARELELOXS000151MeJa-responsive element (MeJaRE) in tomato (L. e.) lipoxygenase (LOX) gene; Related to tomato lipoxygenase gene expression during development and for MeJa (methyl jasmonate)-responsiveness;
 MNF1ZMPPC1S000251"MNF1" binding site in maize (Z.m.) Ppc1 (phosphoenolpyruvate carboxylase) gene promoter; Involved in light induction;
 MRE1S000068"MRE (metal responsive element)"; Consensus sequence of MRE; MRE; MEP-1; MBF-1; MTF-1;
 MREATCHSS000356"MREAtCHS (MRE=Myb Recognition Element)" found in the LRU (light-responsive unit) in Arabidopsis (A.t.) chalcone synthase (CHS) gene promoter; Required for UV-B and UV-A/blue light responsiveness; See S000355;
 MRNA3ENDTAH3S000069Cis element in 3' end region of wheat (T.a.) histone H3 mRNA; 3' end formation; Also found in histone genes of other plants, yeast, etc;
 MRNASTA1CRPSBDS000274mRNA stability determinant found in 5'-UTR of psbD mRNA of Chlamydomonas reinhardtii (C.r.); Required for the stable accumulation; Located within the first 12 nucleotides of the leader region;
 MRNASTA2CRPSBDS000275mRNA stability determinant found in 5'-UTR of psbD mRNA of Chlamydomonas reinhardtii (C.r.); Required for the stable accumulation; Located near position -30 relative to the AUG initiation codon;
 MSACRCYMS000236"MSA (M-specific activator)" motif in Catharanthus roseus (C.r.) B-type cyclin (CYM) promoter; Essential for M phase-specific expression; Found at -66 to -58;
 MYB1ATS000408MYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; W=A/T;
 MYB26PSS000182Myb26 binding site; Myb26 recognizes the c-Myb and P-box-like binding sites representing cis-elements in the promoter regions of several phenylpropanoid biosynthetic genes; Identical to P-box in maize, and to Myb305 binding site in snapdragon;
 MYB2ATS000177Binding site for ATMYB2, an Arabidopsis MYB homolog; ATMYB2 binds oligonucleotides that contained a consensus MYB recognition sequence (TAACTG), such as is in the SV40 enhancer and the maize bronze-1 promoter (Urao et al., Plant Cell 5:1529 (1993)); ATMYB2 is involved in regulation of genes that are responsive to water stress in Arabidopsis; See S000355;
 MYB2CONSENSUSATS000409MYB recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; Y=C/T; K=G/T; See S000177 (MYB2), S000175 (MYBATRD22);
 MYBATRD22S000175Binding site for MYB (ATMYB2) in dehydration-responsive gene, rd22; MYB binding site in rd22 gene of Arabidopsis thaliana; ABA-induction; Located at ca. -141 of rd22 gene; Also MYC at ca. -200 of rd22 gene; See S000174 (MYCATRD22); See S000355;
 MYBCORES000176Binding site for all animal MYB and at least two plant MYB proteins ATMYB1 and ATMYB2, both isolated from Arabidopsis; ATMYB2 is involved in regulation of genes that are responsive to water stress in Arabidopsis; A petunia MYB protein (MYB.Ph3) is involved in regulation of flavonoid biosynthesis (Solano et al. EMBO J 14:1773 (1995)); See S000355;
 MYBGAHVS000181Central element of gibberellin (GA) response complex (GARC) in high-pI alpha-amylase gene in barley (H.v.); Similar to c-myb and v-myb consensus binding site; GAmyb binds specifically to the TAACAAA box in vitro; GAmyb is the sole GA-regulated transcriptional factor required for transcriptional activation of the high-pI alpha-amylase; GARC consist of the pyrimidine, TAACAAA and TATCCAC boxes; GARE in RAmy1A gene; GARE and pyrimidine box in RAmy1A are partially involved in sugar repression;
 MYBMOUSES000178Binding site for mouse c-myb protein; M=A/C; R=A/G;
 MYBPLANTS000167Plant MYB binding site; Consensus sequence related to box P in promoters of phenylpropanoid biosynthetic genes such as PAL, CHS, CHI, DFR, CL, Bz1; Myb305; M=A/C; W=A/T; See S000355; The AmMYB308 and AmMYB330 transcription factors from Antirrhinum majus regulate phenylpropanoid and lignin biosynthesis in transgenic tobacco;
 MYBPZMS000179Core of consensus maize P (myb homolog) binding site; W=A/T; 6 bp core; Maize P gene specifies red pigmentation of kernel pericarp, cob, and other floral organs; P binds to A1 gene, but not Bz1 gene; Maize C1 (myb homolog) activates both A1 and Bz1 genes (Grotewold et al. 1994); W=A/T;
 MYBST1S000180Core motif of MybSt1 (a potato MYB homolog) binding site; MybSt1 cDNA clone was isolated by using CaMV 35S promoter domain A as a probe (Baranowskij et al. 1994); The Myb motif of the MybSt1 protein is distinct from the plant Myb DNA binding domain described so far;
 MYCATERD1S000413MYC recognition sequence (from -466 to -461) necessary for expression of erd1 (early responsive to dehydration) in dehydrated Arabidopsis;
 MYCATRD22S000174Binding site for MYC (rd22BP1) in Arabidopsis (A.t.) dehydration-resposive gene, rd22; MYC binding site in rd22 gene of Arabidopsis thaliana; ABA-induction; Located at ca. -200 of rd22 gene; Also MYB at ca. -141 of rd22 gene; See also S000175 (MYBATRD22);
 MYCCONSENSUSATS000407MYC recognition site found in the promoters of the dehydration-responsive gene rd22 and many other genes in Arabidopsis; Binding site of ATMYC2 (previously known as rd22BP1); see S000144 (E-box; CANNTG), S000174 (MYCATRD22); N=A/T/G/C; MYC recognition sequence in CBF3 promoter; Binding site of ICE1 (inducer of CBF expression 1) that regukates the transcription of CBF/DREB1 genes in the cold in Arabidopsis;

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Cis Element Data from PLACE