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RIKEN Plant Science Center

RIKEN Genomic Sciences Center

Promoter Search Result

There are 33 Results.
IdentifierCis AccessionDescrip tion
 GAREHVAMY1S000038"GARE (gibberellic acid responsive element)" of barley (H.v.) alpha-amylase gene (Amy 1/6-4); GA3;
 GLUTEBOX2OSGT3S000129"Box 2" of rice (O.s.) glutelin Gt3 gene family promoter region; See S000128 GLUTEBOX1A;
 GAGAGMGSA1S000405"GAGA element" found in the promoter of the heme and chlorophyll synthesis gene Gsa1 in soybean (G.m.); GAGA binding protein (GBP) binds to (GA)n/(CT)n DNA;
 GARE1OSREP1S000419"Gibberellin-responsive element (GARE)" found in the promoter region of a cystein proteinase (REP-1) gene in rice; See S000020;
 GARE2S000165Putative gibberellin responsive element; Consensus sequence of GA inducible alpha-amylase genes from rice, barley and wheat;
 GARE2OSREP1S000420"Gibberellin-responsive element (GARE)" found in the promoter region of a cystein proteinase (REP-1) gene in rice; See S000020;
 GARE4HVEPB1S000297"GARE-4" found in the barley (H.v.) EPB-1 (cysteine proteinase) gene promoter; Located between -142 to -156; Required for GA induction; Putative binding site of transcription factor, GAMyB; See S000298;
 GLUTEBP1OSS000048"Glutelin BP-1"; Binding site in the promoter region of glutelin Gt3 gene family of nuclear factor (PB-1); PB-1 is observed only in nuclear extract of developing seeds;
 GATABOXS000039"GATA box"; GATA motif in CaMV 35S promoter; Binding with ASF-2; Three GATA box repeats were found in the promoter of Petunia (P.h.) chlorophyll a/b binding protein, Cab22 gene; Required for high level, light regulated, and tissue specific expression; Conserved in the promoter of all LHCII type I Cab genes;
 GBOX10NTS000272One of 11 G-box sequences in tobacco (N.t.); Required for high-level constitutive expression in seed, leaf, root, axillary bud, almost all parts of flower buds and pollen;
 GBOXLERBCSS000041"G box"; Conserved sequence upstream of light-regulated genes; Sequence found in the promoter region of rbcS of tomato (L.e.) and Arabidopsis; Binding with GBF; M=A/C; See S000345;
 GBOXPCS000324"G box"; Binding site of parsley (P.c.) cytosolic G-box binding factors (cytosolic GBFs); Cytosolic G-Box binding activity is modulated by light; DNA binding activity of cytosolic GBFs is regulated by cytosolic phosphorylation/dephospholylation activities; Cytosolic GBFs are translocated to the nucleus in a light-regulated manner;
 GBOXRELOSAMY3S000206G box-related element found in Amy3D (amylase) promoter of rice (O.s.); Similar to ABRE;
 GBOXSORBCS1S000380"G-box" found in the spinach(S.O.) RBCS-1 gene promoter; Located between -219 and -212; G-box trimer confers relatively high level expression in roots;
 GCAACREPEATZMZEINS000027"GCAAC repeat" found in the 22bp recognition site for beta-1 factor in the promoter of beta-zein (prolamin type) gene of maize (Z.m.); GCAAC is the core recognition sequence of the protein encoded by the retroviral oncogene myb (Biedenkapp et al. Nature 335:835-837 (1988));
 GCBP2ZMGAPC4S000351Binding site of tobacco nuclear factor (GCBP-2) found in the maize (Z.m.) GapC4 (Glyceraldehyde-3-phosphate dehydrogenase 4) gene promoter; Located between -293 and -285; See S000350;
 GGTCCCATGMSAURS000360Sequence found in NDE element in Soybean (G.m.) SAUR (Small Auxin-Up RNA) 15A gene promoter; Involved in auxin responsiveness; See S000270, S000359;
 GCN4OSGLUB1S000277"GCN4 motif" found in GluB-1 gene in rice (O.s.); Required for endosperm-specific expression; See S000276; AACA and ACGT motifs was found sufficient to confer a detectable level of endosperm expression; See S000353, S000354; This motif is the recognition site for a basic leucine zipper transcription factor that belongs to the group of maize Opaque-2 (O2)-like proteins; Although all the RISBZ proteins are able to interact with the GCN4 motif, only RISBZ1 is capable of activating the gene expression;
 GLUTAACAOSS000045"glutelin common motif"; "AACA motif"; Conserved in all member of rice (0.s.) glutelin; -74 to -64;
 GLUTEBOX1OSGT2S000046"Box 1" of rice (O.s.) glutelin Gt2 gene family promoter regions; nuclear factor binding site;
 GLUTEBOX1OSGT3S000128"Box 1" of rice (O.s.) glutelin Gt3 gene family promoter region; See S000128 GLUTEBOX2A;
 GLUTEBOX2OSGT2S000047"Box II" of rice (O.s.) glutelin Gt2 gene family; nuclear factor binding site;
 GLUTEBP2OSS000049"Glutelin BP-2"; Binding with nuclear factors from developing seeds;
 GLUTECOREOSS000050Core site required for binding of the trans-acting factor in the promoter region of rice (O.s.) glutelin (type 2 glutelin gene family);
 GMHDLGMVSPBS000372Binding site of the soybean homeodomein leucine zipper proteins (GmHdl56, GmHdl57); Found in the phosphate response domain of the soybean VspB promoter; Located between -536 and -527; VspB encodes vacuolar glycoprotein acid phosphatase that serve as vegetative storage protein;
 GRAZMRAB17S000150"GRA"; GC-rich rab activator; Found in the promoter of ABA responsive rab17 gene from maize (Z.m.); Important for transcription in leaves but not in embryos; See S000200, S000401 and S000402;
 GRAZMRAB28S000220"GRA"; "GC-rich rab activator"; Found in the promoter of ABA responsive rab28 gene from maize (Z.m.); Similar (seven of 12 bases) to the GRA element from the maize rab17 promoter (S000150; GRAZMRAB17); Found at -138 to -130;
 GREGIONNTPRB1BS000364"G region" found in tobacco (N.t.) PRB-1b gene promoter; Located at -201 to -178; Binding site of nuclear protein; Required for ethylene induction; Contains an 11bp sequence, TAAGAGCCGCC, which is highly conserved in the promoter of ethylene-induced PR genes; Contains a G box motif; See S000365;
 GT1CONSENSUSS000198Consensus GT-1 binding site in many light-regulated genes, e.g., RBCS from many species, PHYA from oat and rice, spinach RCA and PETA, and bean CHS15; R=A/G; W=A/T; For a compilation of related GT elements and factors, see Villain et al. (1996); GT-1 can stabilize the TFIIA-TBP-DNA (TATA box) complex; The activation mechanism of GT-1 may be achieved through direct interaction between TFIIA and GT-1; Binding of GT-1-like factors to the PR-1a promoter influences the level of SA-inducible gene expression;
 GT1CORES000125Critical for GT-1 binding to box II of rbcS; See S000051 GT1MOTIF1; For a compilation of related GT elements and factors, see Villain et al. (1996);
 GT1MOTIFPSRBCSS000051"GT-1 motif"; "Consensus sequence of rbcS BOX II, III, II', III'"; "GT-1 box"; 5' upstream region (-151) of pea (P.s.) rbcS gene; binding with trans factor GT-1; See S000125 GT1CORE; K=G/T; W=A/T; R=A/G; For a compilation of related GT elements and factors, see Villain et al. (1996);
 GT2OSPHYAS000207GT-2 (a rice nuclear protein) binding site in a rice (O.s.) phyA promoter; phyA gene are transcriptionaly repressed in response to light; One of GT elements; For a compilation of related GT elements and factors, see Villain et al. (1996); The HMG-1/Y protein PF1 stimulates binding of the GT-2 to PHYA gene promoter;
 GTGANTG10S000378"GTGA motif" found in the promoter of the tobacco (N.t.) late pollen gene g10 which shows homology to pectate lyase and is the putative homologue of the tomato gene lat56; Located between -96 and -93; See S000280;

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Cis Element Data from PLACE